Going through the material for this session… I am unable to access this file https://utexas.app.box.com/s/vkd36n197m8klbaio3yzoxsee6sx011v as the link directs to a file that has been removed. The UKB LD files are >10TB which unfortunately our server cannot handle at this moment. Is there a preferred pipeline for creating the LD matrix and the weighted matrix from our own data? Eg when one may need to use postmortem confirmation of phenotype to ensure pathology is consistent with the samples and not just ancestry?
